Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav7n-4A0A075B620 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Gm27622-201ENSMUST00000183779 60 ntBASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Ighv8-10-201ENSMUST00000199579 358 ntBASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Rn7sk-201ENSMUST00000083103 331 ntBASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Gm26315-201ENSMUST00000083890 321 ntBASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.44□□□□□ -0.9
Trav7n-4A0A075B620 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav7n-4A0A075B620 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms