Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
PdfS4R2K0 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
PdfS4R2K0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
PdfS4R2K0 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
PdfS4R2K0 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.65□□□□□ -0.86
PdfS4R2K0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.65□□□□□ -0.86
PdfS4R2K0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.65□□□□□ -0.86
PdfS4R2K0 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
PdfS4R2K0 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
PdfS4R2K0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
PdfS4R2K0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.65□□□□□ -0.87
PdfS4R2K0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
PdfS4R2K0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm27772-201ENSMUST00000184900 187 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm38114-201ENSMUST00000191877 1232 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm18905-201ENSMUST00000205454 928 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC9.64□□□□□ -0.87
PdfS4R2K0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
PdfS4R2K0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.64□□□□□ -0.87
PdfS4R2K0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.63□□□□□ -0.87
PdfS4R2K0 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.63□□□□□ -0.87
PdfS4R2K0 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PdfS4R2K0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PdfS4R2K0 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
PdfS4R2K0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm37917-201ENSMUST00000194711 392 ntBASIC9.63□□□□□ -0.87
PdfS4R2K0 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm42612-201ENSMUST00000197986 623 ntBASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm43170-201ENSMUST00000199827 612 ntBASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
PdfS4R2K0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
PdfS4R2K0 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms