Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Mrpl40Q9Z2Q5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm11637-201ENSMUST00000120601 592 ntBASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm4768-201ENSMUST00000206199 686 ntBASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Mrpl40Q9Z2Q5 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Mrpl40Q9Z2Q5 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.58□□□□□ -0.39
Mrpl40Q9Z2Q5 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Mrpl40Q9Z2Q5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms