Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cldn9Q9Z0S7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm11591-201ENSMUST00000120063 702 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cldn9Q9Z0S7 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Daam2-202ENSMUST00000224595 1926 ntBASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Gm8018-201ENSMUST00000173536 789 ntBASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Gm27731-201ENSMUST00000185192 107 ntBASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn9Q9Z0S7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms