Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Smarcb1Q9Z0H3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm19208-201ENSMUST00000213861 912 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Smarcb1Q9Z0H3 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm18227-201ENSMUST00000211082 1468 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm5884-201ENSMUST00000036712 1479 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm14028-201ENSMUST00000117434 479 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm4909-201ENSMUST00000118749 794 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm14277-201ENSMUST00000121195 360 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm16505-201ENSMUST00000179981 232 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Smarcb1Q9Z0H3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Smarcb1Q9Z0H3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms