Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm45925-201ENSMUST00000218882 744 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Lhx9Q9WUH2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm14017-201ENSMUST00000121934 386 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Mir5132-201ENSMUST00000175166 71 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm38317-201ENSMUST00000195564 343 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm44405-201ENSMUST00000198952 126 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm44967-201ENSMUST00000207047 631 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Lhx9Q9WUH2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm24231-201ENSMUST00000104315 133 ntBASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm8018-201ENSMUST00000173536 789 ntBASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm27046-201ENSMUST00000182160 463 ntBASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Mir7070-201ENSMUST00000183657 86 ntBASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.9□□□□□ -0.5
Lhx9Q9WUH2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms