Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Snora73a-201ENSMUST00000082453 205 ntBASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim3Q9R1R2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Gm17420-201ENSMUST00000164753 153 ntBASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Gm10478-201ENSMUST00000084451 396 ntBASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim3Q9R1R2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.81□□□□□ -0.52
Trim3Q9R1R2 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.81□□□□□ -0.52
Trim3Q9R1R2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms