Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Gm18515-201ENSMUST00000219755 797 ntBASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prpf40aQ9R1C7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prpf40aQ9R1C7 Mir7085-201ENSMUST00000184353 66 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms