Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh17Q9R100 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cdh17Q9R100 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm12490-201ENSMUST00000120255 560 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm42599-201ENSMUST00000201308 469 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm5035-201ENSMUST00000215581 927 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.2□□□□□ -0.46
Cdh17Q9R100 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Cdh17Q9R100 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.19□□□□□ -0.46
Cdh17Q9R100 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm27243-201ENSMUST00000183964 521 ntBASIC12.19□□□□□ -0.46
Cdh17Q9R100 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.19□□□□□ -0.46
Cdh17Q9R100 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.19□□□□□ -0.46
Cdh17Q9R100 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.19□□□□□ -0.46
Cdh17Q9R100 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.19□□□□□ -0.46
Cdh17Q9R100 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Cdh17Q9R100 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.18□□□□□ -0.46
Cdh17Q9R100 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Cdh17Q9R100 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms