Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Upk3aQ9JKX8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm24845-201ENSMUST00000158034 109 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Mir1938-201ENSMUST00000158746 100 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm21769-201ENSMUST00000211922 111 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Gm30285-201ENSMUST00000214614 422 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Cts7-204ENSMUST00000225321 1257 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Upk3aQ9JKX8 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm14832-201ENSMUST00000121289 322 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm26956-201ENSMUST00000182176 986 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm44882-201ENSMUST00000205702 802 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gm45331-201ENSMUST00000209868 554 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3aQ9JKX8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms