Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm27196-201ENSMUST00000184787 2582 ntBASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm13829-201ENSMUST00000119600 138 ntBASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm24548-201ENSMUST00000158650 108 ntBASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm24136-201ENSMUST00000083374 165 ntBASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Daam2-202ENSMUST00000224595 1926 ntBASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Chmp4bQ9D8B3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Gm44292-201ENSMUST00000205194 2364 ntBASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Chmp4bQ9D8B3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm8738-201ENSMUST00000172606 329 ntBASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm44405-201ENSMUST00000198952 126 ntBASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Chmp4bQ9D8B3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Chmp4bQ9D8B3 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms