Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Gm8213-201ENSMUST00000118191 441 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Gm12363-201ENSMUST00000122250 668 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Gm37497-201ENSMUST00000195830 798 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.99□□□□□ -0.01
Chmp4cQ9D7F7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gm27331-201ENSMUST00000183705 60 ntBASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gm6091-201ENSMUST00000098307 165 ntBASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.98□□□□□ -0.01
Chmp4cQ9D7F7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Snord83b-201ENSMUST00000104546 94 ntBASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Gm29705-201ENSMUST00000212598 474 ntBASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chmp4cQ9D7F7 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms