Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gm5425-201ENSMUST00000214125 459 ntBASIC12.67□□□□□ -0.38
Sf3a3Q9D554 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sf3a3Q9D554 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Gm15376-201ENSMUST00000122258 783 ntBASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sf3a3Q9D554 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Gm5264-201ENSMUST00000190584 848 ntBASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Gm10253-201ENSMUST00000194270 940 ntBASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Sf3a3Q9D554 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms