Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.6□□□□□ -0.39
Trim42Q9D2H5 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trim42Q9D2H5 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim42Q9D2H5 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.58□□□□□ -0.39
Trim42Q9D2H5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
Trim42Q9D2H5 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trim42Q9D2H5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Mir686-201ENSMUST00000102174 109 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm13453-201ENSMUST00000118708 357 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm7063-201ENSMUST00000186840 981 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm26035-201ENSMUST00000083065 308 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trim42Q9D2H5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trim42Q9D2H5 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms