Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm12928-201ENSMUST00000117115 573 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm8805-201ENSMUST00000117848 313 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm23363-201ENSMUST00000175024 79 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Mir6977-201ENSMUST00000184960 64 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm8463-201ENSMUST00000208573 613 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.85□□□□□ -0.51
Upk1aQ9D132 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Upk1aQ9D132 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Upk1aQ9D132 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Gm13123-201ENSMUST00000122173 492 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Auts2-212ENSMUST00000178555 309 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.84□□□□□ -0.51
Upk1aQ9D132 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Upk1aQ9D132 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Upk1aQ9D132 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.83□□□□□ -0.52
Upk1aQ9D132 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.83□□□□□ -0.52
Upk1aQ9D132 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms