Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Snora78-201ENSMUST00000158630 128 ntBASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Gm24548-201ENSMUST00000158650 108 ntBASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Gm45925-201ENSMUST00000218882 744 ntBASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx56Q9D0R4 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm5370-201ENSMUST00000187187 574 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm19184-201ENSMUST00000196798 928 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm44405-201ENSMUST00000198952 126 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ddx56Q9D0R4 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Gm13315-201ENSMUST00000120376 991 ntBASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Gm11597-201ENSMUST00000121423 964 ntBASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Gm37008-201ENSMUST00000195712 319 ntBASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ddx56Q9D0R4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms