Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm13616-201ENSMUST00000120600 222 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm15487-201ENSMUST00000122373 465 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm9630-201ENSMUST00000178304 885 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm28760-201ENSMUST00000185995 736 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm38223-201ENSMUST00000194484 695 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Gm43514-201ENSMUST00000198852 424 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 AC155258.1-201ENSMUST00000219303 253 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Hdhd3Q9CYW4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Hdhd3Q9CYW4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Hdhd3Q9CYW4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms