Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Gm2495-201ENSMUST00000191160 466 ntBASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Gm18018-201ENSMUST00000198273 408 ntBASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.67□□□□□ -0.22
Ssr1Q9CY50 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Gm28911-201ENSMUST00000188837 117 ntBASIC13.66□□□□□ -0.22
Ssr1Q9CY50 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.66□□□□□ -0.22
Ssr1Q9CY50 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ssr1Q9CY50 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ssr1Q9CY50 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ssr1Q9CY50 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms