Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gm27731-201ENSMUST00000185192 107 ntBASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Khdc3Q9CWU5 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Gm12384-201ENSMUST00000119228 919 ntBASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Gm13829-201ENSMUST00000119600 138 ntBASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Khdc3Q9CWU5 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Khdc3Q9CWU5 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm11425-201ENSMUST00000119608 498 ntBASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm16296-201ENSMUST00000159905 325 ntBASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm9396-201ENSMUST00000076703 567 ntBASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Khdc3Q9CWU5 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms