Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm14494-201ENSMUST00000118786 435 ntBASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm15467-201ENSMUST00000120582 445 ntBASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
RTRAFQ9CQE8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
RTRAFQ9CQE8 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms