Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm12928-201ENSMUST00000117115 573 ntBASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm27701-201ENSMUST00000184498 110 ntBASIC11.86□□□□□ -0.51
Ska1Q9CPV1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm44069-201ENSMUST00000204898 506 ntBASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm26035-201ENSMUST00000083065 308 ntBASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.86□□□□□ -0.51
Ska1Q9CPV1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gm8515-201ENSMUST00000194852 576 ntBASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 CT025535.1-201ENSMUST00000227172 491 ntBASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.85□□□□□ -0.51
Ska1Q9CPV1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms