Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Gm5053-201ENSMUST00000208361 1678 ntBASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim11Q99PQ2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Gm11964-201ENSMUST00000120982 444 ntBASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.27□□□□□ -0.13
Trim11Q99PQ2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim11Q99PQ2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Gm40466-201ENSMUST00000212174 422 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim11Q99PQ2 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Gm11424-201ENSMUST00000121929 829 ntBASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Gm18584-201ENSMUST00000203098 964 ntBASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim11Q99PQ2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms