Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Gm9550-201ENSMUST00000161130 862 ntBASIC15.43■□□□□ 0.06
Trim34aQ99PP6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Gm9211-201ENSMUST00000182882 975 ntBASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.43■□□□□ 0.06
Trim34aQ99PP6 CT009718.3-201ENSMUST00000221116 367 ntBASIC15.43■□□□□ 0.06
Trim34aQ99PP6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim34aQ99PP6 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Gm22133-201ENSMUST00000102082 109 ntBASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Gm43962-201ENSMUST00000203898 190 ntBASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim34aQ99PP6 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Gm18038-201ENSMUST00000197900 485 ntBASIC15.41■□□□□ 0.06
Trim34aQ99PP6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim34aQ99PP6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Gm23119-201ENSMUST00000158610 140 ntBASIC15.4■□□□□ 0.06
Trim34aQ99PP6 Gm3508-201ENSMUST00000186012 792 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms