Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Gm3329-201ENSMUST00000159873 556 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.41□□□□□ -0.42
Cdh23Q99PF4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gm44647-201ENSMUST00000207402 428 ntBASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gm25226-201ENSMUST00000158198 123 ntBASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.4□□□□□ -0.42
Cdh23Q99PF4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Cdh23Q99PF4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cdh23Q99PF4 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm42816-201ENSMUST00000198433 325 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm3726-201ENSMUST00000203110 785 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm16305-201ENSMUST00000140747 556 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm12906-201ENSMUST00000154610 441 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm37197-201ENSMUST00000195607 401 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Gm18798-201ENSMUST00000187264 1700 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.39□□□□□ -0.43
Cdh23Q99PF4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms