Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm37246-201ENSMUST00000192665 835 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm8365-201ENSMUST00000197334 648 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gm43916-201ENSMUST00000205062 967 ntBASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nkx6-1Q99MA9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm23251-201ENSMUST00000103773 110 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Mir874-201ENSMUST00000104769 76 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm6754-201ENSMUST00000117124 913 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm13315-201ENSMUST00000120376 991 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm17391-201ENSMUST00000171036 126 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nkx6-1Q99MA9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.77□□□□□ -0.52
Nkx6-1Q99MA9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.77□□□□□ -0.53
Nkx6-1Q99MA9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms