Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.14□□□□□ -0.47
Cstf3Q99LI7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cstf3Q99LI7 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm11478-201ENSMUST00000117851 599 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cstf3Q99LI7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm26927-201ENSMUST00000182385 965 ntBASIC12.12□□□□□ -0.47
Cstf3Q99LI7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.12□□□□□ -0.47
Cstf3Q99LI7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Cstf3Q99LI7 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms