Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm43589-201ENSMUST00000199400 1523 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Anp32-ps-201ENSMUST00000118265 388 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm4271-201ENSMUST00000174444 973 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Mir7085-201ENSMUST00000184353 66 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm27731-201ENSMUST00000185192 107 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29663-201ENSMUST00000186962 853 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm37727-201ENSMUST00000191637 819 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm37497-201ENSMUST00000195830 798 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm19065-202ENSMUST00000203910 1165 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm40466-201ENSMUST00000212174 422 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 AC069561.2-201ENSMUST00000217596 420 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 AC164302.1-201ENSMUST00000227036 433 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pcdhb20Q91XZ9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm11320-201ENSMUST00000119434 463 ntBASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 G930045G22Rik-202ENSMUST00000161723 673 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm37708-201ENSMUST00000192337 895 ntBASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm34716-201ENSMUST00000194060 621 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms