Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm25927-201ENSMUST00000175058 117 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pcdhb4Q91XZ6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Gm11814-201ENSMUST00000119515 929 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Gm26185-201ENSMUST00000157692 266 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdhb4Q91XZ6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gm14704-201ENSMUST00000120300 874 ntBASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gm11637-201ENSMUST00000120601 592 ntBASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gm22331-201ENSMUST00000158066 136 ntBASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms