Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gm27390-201ENSMUST00000184516 176 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gm38158-201ENSMUST00000194617 339 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gm25857-201ENSMUST00000082788 129 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Mir1247-201ENSMUST00000116706 82 ntBASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm39404-201ENSMUST00000216350 313 ntBASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdhb6Q91XZ4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm12058-201ENSMUST00000118614 437 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm43133-201ENSMUST00000197472 463 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm18062-201ENSMUST00000208020 547 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm6007-201ENSMUST00000208170 823 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Gm18055-201ENSMUST00000208254 547 ntBASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdhb6Q91XZ4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 137.5 ms