Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb8Q91XZ2 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb8Q91XZ2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb8Q91XZ2 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Pcdhb8Q91XZ2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm15703-201ENSMUST00000120250 880 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm17150-201ENSMUST00000165577 381 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm24526-201ENSMUST00000082921 158 ntBASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Pcdhb8Q91XZ2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm40466-201ENSMUST00000212174 422 ntBASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhb8Q91XZ2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb8Q91XZ2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms