Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.79□□□□□ -0.68
Tram1Q91V04 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.79□□□□□ -0.68
Tram1Q91V04 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
Tram1Q91V04 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tram1Q91V04 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.78□□□□□ -0.68
Tram1Q91V04 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.78□□□□□ -0.68
Tram1Q91V04 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tram1Q91V04 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.77□□□□□ -0.68
Tram1Q91V04 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Tram1Q91V04 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.77□□□□□ -0.68
Tram1Q91V04 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.77□□□□□ -0.68
Tram1Q91V04 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tram1Q91V04 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm13453-201ENSMUST00000118708 357 ntBASIC10.77□□□□□ -0.69
Tram1Q91V04 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Tram1Q91V04 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm6888-201ENSMUST00000221983 706 ntBASIC10.77□□□□□ -0.69
Tram1Q91V04 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.77□□□□□ -0.69
Tram1Q91V04 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm16372-201ENSMUST00000073088 450 ntBASIC10.77□□□□□ -0.69
Tram1Q91V04 Mir339-201ENSMUST00000083659 96 ntBASIC10.77□□□□□ -0.69
Tram1Q91V04 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Tram1Q91V04 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Tram1Q91V04 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Gm5648-201ENSMUST00000122244 1587 ntBASIC10.77□□□□□ -0.69
Tram1Q91V04 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.77□□□□□ -0.69
Tram1Q91V04 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tram1Q91V04 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms