Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.97□□□□□ -0.33
Trim60Q8VI40 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim60Q8VI40 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm11424-201ENSMUST00000121929 829 ntBASIC12.96□□□□□ -0.33
Trim60Q8VI40 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.96□□□□□ -0.33
Trim60Q8VI40 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm24526-201ENSMUST00000082921 158 ntBASIC12.96□□□□□ -0.33
Trim60Q8VI40 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim60Q8VI40 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.96□□□□□ -0.34
Trim60Q8VI40 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim60Q8VI40 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Cog3-203ENSMUST00000227473 4197 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm24231-201ENSMUST00000104315 133 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Snord83b-201ENSMUST00000104546 94 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm13369-201ENSMUST00000119442 987 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm27331-201ENSMUST00000183705 60 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm10146-201ENSMUST00000072739 309 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Gm5356-201ENSMUST00000093326 615 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim60Q8VI40 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trim60Q8VI40 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.95□□□□□ -0.34
Trim60Q8VI40 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim60Q8VI40 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms