Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpa1Q8VEE4 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Mir7684-201ENSMUST00000183858 60 ntBASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Mir8102-201ENSMUST00000184148 139 ntBASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpa1Q8VEE4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Gm27989-201ENSMUST00000184721 107 ntBASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpa1Q8VEE4 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms