Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.14□□□□□ -0.47
Rnf8Q8VC56 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.14□□□□□ -0.47
Rnf8Q8VC56 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf8Q8VC56 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Gm44069-201ENSMUST00000204898 506 ntBASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Gm6458-201ENSMUST00000211573 635 ntBASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rnf8Q8VC56 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm12390-201ENSMUST00000117897 397 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm11618-201ENSMUST00000117946 267 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms