Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC17.6■□□□□ 0.41
Cd109Q8R422 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm11511-201ENSMUST00000118146 540 ntBASIC17.6■□□□□ 0.41
Cd109Q8R422 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm44545-201ENSMUST00000208262 746 ntBASIC17.6■□□□□ 0.41
Cd109Q8R422 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC17.6■□□□□ 0.41
Cd109Q8R422 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cd109Q8R422 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cd109Q8R422 Gm43677-201ENSMUST00000198098 2378 ntBASIC17.59■□□□□ 0.41
Cd109Q8R422 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cd109Q8R422 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC17.59■□□□□ 0.41
Cd109Q8R422 Gm11667-201ENSMUST00000119828 486 ntBASIC17.59■□□□□ 0.41
Cd109Q8R422 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Gm8100-201ENSMUST00000182906 988 ntBASIC17.59■□□□□ 0.41
Cd109Q8R422 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC17.59■□□□□ 0.41
Cd109Q8R422 Gm44711-201ENSMUST00000205414 1264 ntBASIC17.59■□□□□ 0.41
Cd109Q8R422 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cd109Q8R422 Gm18782-201ENSMUST00000209023 1399 ntBASIC17.59■□□□□ 0.41
Cd109Q8R422 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cd109Q8R422 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.58■□□□□ 0.41
Cd109Q8R422 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cd109Q8R422 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC17.58■□□□□ 0.41
Cd109Q8R422 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm12857-201ENSMUST00000117678 592 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm17391-201ENSMUST00000171036 126 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm19459-201ENSMUST00000176240 835 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm2965-201ENSMUST00000198365 343 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm42629-201ENSMUST00000199063 1102 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm43916-201ENSMUST00000205062 967 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm44882-201ENSMUST00000205702 802 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC17.58■□□□□ 0.41
Cd109Q8R422 Gm44551-201ENSMUST00000208804 171 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 AC151275.1-201ENSMUST00000224870 585 ntBASIC17.58■□□□□ 0.41
Cd109Q8R422 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cd109Q8R422 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd109Q8R422 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Cd109Q8R422 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd109Q8R422 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd109Q8R422 Gm44999-201ENSMUST00000207456 1493 ntBASIC17.58■□□□□ 0.4
Cd109Q8R422 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd109Q8R422 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd109Q8R422 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd109Q8R422 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cd109Q8R422 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cd109Q8R422 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Cd109Q8R422 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.58■□□□□ 0.4
Cd109Q8R422 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm5419-201ENSMUST00000119301 527 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm8956-201ENSMUST00000203939 825 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm45909-201ENSMUST00000212413 1031 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 AC141438.2-201ENSMUST00000215068 271 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 AC135114.1-201ENSMUST00000228682 270 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm9826-201ENSMUST00000029124 1299 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm9785-201ENSMUST00000062642 1006 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm21998-201ENSMUST00000117552 1308 ntBASIC17.57■□□□□ 0.4
Cd109Q8R422 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms