Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Zcchc9Q8R1J3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm13492-201ENSMUST00000119772 665 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm13570-201ENSMUST00000140763 309 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm19208-201ENSMUST00000213861 912 ntBASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Zcchc9Q8R1J3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm13665-201ENSMUST00000120830 528 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm22902-201ENSMUST00000158488 302 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.54□□□□□ -0.4
Zcchc9Q8R1J3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Zcchc9Q8R1J3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms