Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm13916-201ENSMUST00000117368 628 ntBASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 AC154257.1-202ENSMUST00000224729 843 ntBASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm37859-201ENSMUST00000195529 2173 ntBASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gm11470-201ENSMUST00000118868 1475 ntBASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gm5257-201ENSMUST00000121823 790 ntBASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gm43610-201ENSMUST00000199117 365 ntBASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gm18059-201ENSMUST00000208073 580 ntBASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Gm45594-201ENSMUST00000211717 241 ntBASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC16.3■□□□□ 0.2
Ddx54Q8K4L0 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 n-R5s64-201ENSMUST00000102019 119 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm13549-201ENSMUST00000118339 796 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm7722-201ENSMUST00000120646 741 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm13022-201ENSMUST00000121181 285 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm4654-201ENSMUST00000183305 982 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm44958-201ENSMUST00000203734 736 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm45575-201ENSMUST00000210283 548 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 CT025602.2-201ENSMUST00000226553 772 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Gm9361-201ENSMUST00000198695 1507 ntBASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ddx54Q8K4L0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms