Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.84□□□□□ -0.51
Clrn1Q8K445 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Clrn1Q8K445 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.83□□□□□ -0.51
Clrn1Q8K445 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Clrn1Q8K445 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.83□□□□□ -0.51
Clrn1Q8K445 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.83□□□□□ -0.51
Clrn1Q8K445 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm12957-201ENSMUST00000117835 377 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Mir7085-201ENSMUST00000184353 66 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 AY702102-202ENSMUST00000194651 1173 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm26035-201ENSMUST00000083065 308 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn1Q8K445 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.83□□□□□ -0.52
Clrn1Q8K445 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn1Q8K445 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Daam2-202ENSMUST00000224595 1926 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm12742-201ENSMUST00000117326 410 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm6023-201ENSMUST00000118217 606 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm13323-201ENSMUST00000120245 1151 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm8062-201ENSMUST00000139696 444 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Rmrp-201ENSMUST00000157463 271 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm37424-201ENSMUST00000191727 561 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm19184-201ENSMUST00000196798 928 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.82□□□□□ -0.52
Clrn1Q8K445 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn1Q8K445 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn1Q8K445 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms