Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm14660-201ENSMUST00000119809 575 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm24644-201ENSMUST00000157114 139 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm4271-201ENSMUST00000174444 973 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm4768-201ENSMUST00000206199 686 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm29705-201ENSMUST00000212598 474 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcpip1Q8CDG3 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm27847-201ENSMUST00000183711 107 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm27375-201ENSMUST00000183799 107 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm27731-201ENSMUST00000185192 107 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm19184-201ENSMUST00000196798 928 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Gm7561-201ENSMUST00000211203 886 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Vcpip1Q8CDG3 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Paupar-201ENSMUST00000194826 3482 ntBASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Map1b-203ENSMUST00000223725 2669 ntBASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.46□□□□□ -0.25
Vcpip1Q8CDG3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms