Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pabpn1Q8CCS6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Gm23612-201ENSMUST00000103823 110 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Gm15707-201ENSMUST00000118804 996 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Mir1905-201ENSMUST00000122779 82 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Gm23576-201ENSMUST00000179918 110 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Gm44216-201ENSMUST00000203942 157 ntBASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pabpn1Q8CCS6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 Gm37133-201ENSMUST00000192705 1922 ntBASIC19.02■□□□□ 0.63
Pabpn1Q8CCS6 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm44891-201ENSMUST00000208817 2223 ntBASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm15625-201ENSMUST00000117617 1093 ntBASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm6612-201ENSMUST00000170777 395 ntBASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm26272-201ENSMUST00000179241 132 ntBASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 AC158392.3-201ENSMUST00000224271 1284 ntBASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pabpn1Q8CCS6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Mir8093-201ENSMUST00000185043 137 ntBASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pabpn1Q8CCS6 Gm18552-201ENSMUST00000187425 538 ntBASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms