Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm11531-201ENSMUST00000117614 555 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm37201-201ENSMUST00000191845 523 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm37391-201ENSMUST00000194891 2318 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm45331-201ENSMUST00000209868 554 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm5950-201ENSMUST00000213337 772 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Gm9368-201ENSMUST00000219348 831 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Ccdc60Q8C4J0 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm15198-201ENSMUST00000117283 177 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm12241-201ENSMUST00000118330 726 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm14999-201ENSMUST00000121039 624 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm18304-201ENSMUST00000189162 546 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Gm6621-201ENSMUST00000193251 772 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Ccdc60Q8C4J0 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Gm25043-201ENSMUST00000158604 212 ntBASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Gm2991-201ENSMUST00000173338 480 ntBASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Gm6007-201ENSMUST00000208170 823 ntBASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Cts7-204ENSMUST00000225321 1257 ntBASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Gm10076-201ENSMUST00000073238 384 ntBASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Ccdc60Q8C4J0 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Ccdc60Q8C4J0 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms