Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tsen54Q8C2A2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tsen54Q8C2A2 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Arhgef33-209ENSMUST00000225223 714 ntBASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tsen54Q8C2A2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Gm13859-201ENSMUST00000119936 1423 ntBASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tsen54Q8C2A2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms