Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm4984-201ENSMUST00000115987 360 ntBASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm12291-201ENSMUST00000121627 311 ntBASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm38671-201ENSMUST00000200573 130 ntBASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Daam2-202ENSMUST00000224595 1926 ntBASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Gm28693-202ENSMUST00000190758 331 ntBASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Gm26035-201ENSMUST00000083065 308 ntBASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Vps9d1Q8C190 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Vps9d1Q8C190 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms