Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm4204-201ENSMUST00000110798 1231 ntBASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm27430-201ENSMUST00000184585 107 ntBASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm44333-201ENSMUST00000197168 107 ntBASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Smco3Q8BQM7 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm27397-201ENSMUST00000184997 107 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm17837-201ENSMUST00000186435 985 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm44094-201ENSMUST00000204703 2030 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Daam2-202ENSMUST00000224595 1926 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Smco3Q8BQM7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Smco3Q8BQM7 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms