Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm6430-201ENSMUST00000054664 1248 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Matn2-206ENSMUST00000228570 2798 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm6771-201ENSMUST00000182716 1001 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm29155-201ENSMUST00000185910 269 ntBASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Usp54Q8BL06 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm45266-201ENSMUST00000210111 2173 ntBASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm14193-201ENSMUST00000105067 153 ntBASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm11660-201ENSMUST00000120955 412 ntBASIC17.48■□□□□ 0.39
Usp54Q8BL06 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Gm18041-201ENSMUST00000218210 618 ntBASIC17.48■□□□□ 0.39
Usp54Q8BL06 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC17.48■□□□□ 0.39
Usp54Q8BL06 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 AC160405.1-201ENSMUST00000218207 1545 ntBASIC17.47■□□□□ 0.39
Usp54Q8BL06 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp54Q8BL06 AC129931.1-201ENSMUST00000228865 1861 ntBASIC17.47■□□□□ 0.39
Usp54Q8BL06 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp54Q8BL06 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC17.46■□□□□ 0.39
Usp54Q8BL06 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp54Q8BL06 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms