Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 Gm8706-201ENSMUST00000197372 1491 ntBASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rnf144bQ8BKD6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm15703-201ENSMUST00000120250 880 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm4768-201ENSMUST00000206199 686 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Map1b-203ENSMUST00000223725 2669 ntBASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Rnf144bQ8BKD6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Gm29127-201ENSMUST00000188304 517 ntBASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Rnf144bQ8BKD6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms