Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp2bQ8BJF9 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Gm14921-201ENSMUST00000118643 908 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Gm9630-201ENSMUST00000178304 885 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Auts2-212ENSMUST00000178555 309 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp2bQ8BJF9 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2bQ8BJF9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2bQ8BJF9 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2bQ8BJF9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2bQ8BJF9 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.83□□□□□ -0.35
Chmp2bQ8BJF9 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp2bQ8BJF9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm8810-201ENSMUST00000172895 754 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm18018-201ENSMUST00000198273 408 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Gm7287-201ENSMUST00000205267 602 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms