Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gm16479-201ENSMUST00000121706 932 ntBASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Gm7653-201ENSMUST00000214567 508 ntBASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 AC155237.1-201ENSMUST00000226196 1279 ntBASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc40Q8BI79 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc40Q8BI79 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc40Q8BI79 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm8805-201ENSMUST00000117848 313 ntBASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm14921-201ENSMUST00000118643 908 ntBASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm13813-201ENSMUST00000120998 787 ntBASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm24644-201ENSMUST00000157114 139 ntBASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm5035-201ENSMUST00000215581 927 ntBASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc40Q8BI79 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Gm22331-201ENSMUST00000158066 136 ntBASIC13.13□□□□□ -0.31
Ccdc40Q8BI79 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms