Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm11803-201ENSMUST00000119966 444 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm8810-201ENSMUST00000172895 754 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm22121-201ENSMUST00000175148 54 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf38Q8BI21 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm11478-201ENSMUST00000117851 599 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm16296-201ENSMUST00000159905 325 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm17208-201ENSMUST00000168388 535 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf38Q8BI21 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms