Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Clrn3Q8BHH8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gm14704-201ENSMUST00000120300 874 ntBASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Gm6266-201ENSMUST00000203844 806 ntBASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Clrn3Q8BHH8 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm13829-201ENSMUST00000119600 138 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms